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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11157053 chr14:39759088 C/T LOC647288 chr13:75811890-75814517:- 0.41 7.09 6.36E-12 Box Plot
BLCA rs11157054 chr14:39759134 A/G LOC647288 chr13:75811890-75814517:- 0.41 7.14 4.63E-12 Box Plot
BLCA rs11157057 chr14:39774149 A/C LOC647288 chr13:75811890-75814517:- 0.41 6.98 1.29E-11 Box Plot
BLCA rs11157058 chr14:39782972 G/A LOC647288 chr13:75811890-75814517:- -0.4 -6.43 3.77E-10 Box Plot
BLCA rs11157061 chr14:39811785 T/C LOC647288 chr13:75811890-75814517:- -0.42 -6.78 4.45E-11 Box Plot
BLCA rs1115715 chr7:40827962 G/T FAM175A chr4:84380670-84444501:- 0.33 5.99 4.97E-9 Box Plot
BLCA rs11157651 chr14:22999542 A/G CHD8 chr14:21853353-21924285:- 0.57 6 4.62E-9 Box Plot
BLCA rs11159961 chr14:90746812 A/G CDC42BPB chr14:103398716-103523799:- 0.68 6.01 4.34E-9 Box Plot
BLCA rs11159961 chr14:90746812 A/G MARK3 chr14:103851729-103970168:+ 0.75 6.01 4.27E-9 Box Plot
BLCA rs11159961 chr14:90746812 A/G MTA1 chr14:105886157-105937066:+ 0.71 6.09 2.71E-9 Box Plot
BLCA rs111645740 chr4:164135167 T/C KRTAP13-1 chr21:31768392-31769140:+ 0.18 5.95 5.96E-9 Box Plot
BLCA rs1116939 chr2:149911354 T/C FAM181A chr14:94385240-94395954:+ -0.52 -6.08 2.89E-9 Box Plot
BLCA rs11171739 chr12:56470625 A/G RPS26P11 chrX:71264395-71264742:+ 0.45 7.75 8.18E-14 Box Plot
BLCA rs1117858 chr4:105068068 T/A SPINT1 chr15:41136216-41150405:+ 0.43 6.08 2.94E-9 Box Plot
BLCA rs111809164 chr21:47170790 G/GTA HMX1 chr4:8847802-8873543:- 0.39 6.26 1.03E-9 Box Plot